checkTools.C

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/*---------------------------------------------------------------------------*\
  =========                 |
  \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
   \\    /   O peration     |
    \\  /    A nd           | Copyright (C) 2015 OpenFOAM Foundation
     \\/     M anipulation  | Copyright (C) 2015 OpenCFD Ltd.
-------------------------------------------------------------------------------
License
    This file is part of OpenFOAM.
 
    OpenFOAM is free software: you can redistribute it and/or modify it
    under the terms of the GNU General Public License as published by
    the Free Software Foundation, either version 3 of the License, or
    (at your option) any later version.
 
    OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
    ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
    FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License
    for more details.
 
    You should have received a copy of the GNU General Public License
    along with OpenFOAM.  If not, see <http://www.gnu.org/licenses/>.
 
\*---------------------------------------------------------------------------*/
 
#include "checkTools.H"
#include "polyMesh.H"
#include "globalMeshData.H"
#include "hexMatcher.H"
#include "wedgeMatcher.H"
#include "prismMatcher.H"
#include "pyrMatcher.H"
#include "tetWedgeMatcher.H"
#include "tetMatcher.H"
#include "IOmanip.H"
#include "faceSet.H"
#include "cellSet.H"
#include "PatchTools.H"
#include "Time.H"
#include "surfaceWriter.H"
#include "sampledSurfaces.H"
#include "syncTools.H"
 
 
void Foam::printMeshStats(const polyMesh& mesh, const bool allTopology)
{
    Info<< "Mesh stats" << nl
        << "    points:           "
        << returnReduce(mesh.points().size(), sumOp<label>()) << nl;
 
    label nInternalPoints = returnReduce
    (
        mesh.nInternalPoints(),
        sumOp<label>()
    );
 
    if (nInternalPoints != -Pstream::nProcs())
    {
        Info<< "    internal points:  " << nInternalPoints << nl;
 
        if (returnReduce(mesh.nInternalPoints(), minOp<label>()) == -1)
        {
            WarningInFunction
                << "Some processors have their points sorted into internal"
                << " and external and some do not." << endl
                << "This can cause problems later on." << endl;
        }
    }
 
    if (allTopology && nInternalPoints != -Pstream::nProcs())
    {
        label nEdges = returnReduce(mesh.nEdges(), sumOp<label>());
        label nInternalEdges = returnReduce
        (
            mesh.nInternalEdges(),
            sumOp<label>()
        );
        label nInternal1Edges = returnReduce
        (
            mesh.nInternal1Edges(),
            sumOp<label>()
        );
        label nInternal0Edges = returnReduce
        (
            mesh.nInternal0Edges(),
            sumOp<label>()
        );
 
        Info<< "    edges:            " << nEdges << nl
            << "    internal edges:   " << nInternalEdges << nl
            << "    internal edges using one boundary point:   "
            << nInternal1Edges-nInternal0Edges << nl
            << "    internal edges using two boundary points:  "
            << nInternalEdges-nInternal1Edges << nl;
    }
 
    label nFaces = returnReduce(mesh.faces().size(), sumOp<label>());
    label nIntFaces = returnReduce(mesh.faceNeighbour().size(), sumOp<label>());
    label nCells = returnReduce(mesh.cells().size(), sumOp<label>());
 
    Info<< "    faces:            " << nFaces << nl
        << "    internal faces:   " << nIntFaces << nl
        << "    cells:            " << nCells << nl
        << "    faces per cell:   "
        << scalar(nFaces + nIntFaces)/max(1, nCells) << nl
        << "    boundary patches: " << mesh.boundaryMesh().size() << nl
        << "    point zones:      " << mesh.pointZones().size() << nl
        << "    face zones:       " << mesh.faceZones().size() << nl
        << "    cell zones:       " << mesh.cellZones().size() << nl
        << endl;
 
    // Construct shape recognizers
    hexMatcher hex;
    prismMatcher prism;
    wedgeMatcher wedge;
    pyrMatcher pyr;
    tetWedgeMatcher tetWedge;
    tetMatcher tet;
 
    // Counters for different cell types
    label nHex = 0;
    label nWedge = 0;
    label nPrism = 0;
    label nPyr = 0;
    label nTet = 0;
    label nTetWedge = 0;
    label nUnknown = 0;
 
    Map<label> polyhedralFaces;
 
    for (label cellI = 0; cellI < mesh.nCells(); cellI++)
    {
        if (hex.isA(mesh, cellI))
        {
            nHex++;
        }
        else if (tet.isA(mesh, cellI))
        {
            nTet++;
        }
        else if (pyr.isA(mesh, cellI))
        {
            nPyr++;
        }
        else if (prism.isA(mesh, cellI))
        {
            nPrism++;
        }
        else if (wedge.isA(mesh, cellI))
        {
            nWedge++;
        }
        else if (tetWedge.isA(mesh, cellI))
        {
            nTetWedge++;
        }
        else
        {
            nUnknown++;
            polyhedralFaces(mesh.cells()[cellI].size())++;
        }
    }
 
    reduce(nHex,sumOp<label>());
    reduce(nPrism,sumOp<label>());
    reduce(nWedge,sumOp<label>());
    reduce(nPyr,sumOp<label>());
    reduce(nTetWedge,sumOp<label>());
    reduce(nTet,sumOp<label>());
    reduce(nUnknown,sumOp<label>());
 
    Info<< "Overall number of cells of each type:" << nl
        << "    hexahedra:     " << nHex << nl
        << "    prisms:        " << nPrism << nl
        << "    wedges:        " << nWedge << nl
        << "    pyramids:      " << nPyr << nl
        << "    tet wedges:    " << nTetWedge << nl
        << "    tetrahedra:    " << nTet << nl
        << "    polyhedra:     " << nUnknown
        << endl;
 
    if (nUnknown > 0)
    {
        Pstream::mapCombineGather(polyhedralFaces, plusEqOp<label>());
 
        Info<< "    Breakdown of polyhedra by number of faces:" << nl
            << "        faces" << "   number of cells" << endl;
 
        const labelList sortedKeys = polyhedralFaces.sortedToc();
 
        forAll(sortedKeys, keyI)
        {
            const label nFaces = sortedKeys[keyI];
 
            Info<< setf(std::ios::right) << setw(13)
                << nFaces << "   " << polyhedralFaces[nFaces] << nl;
        }
    }
 
    Info<< endl;
}
 
 
void Foam::mergeAndWrite
(
    const surfaceWriter& writer,
    const faceSet& set
)
{
    const polyMesh& mesh = refCast<const polyMesh>(set.db());
 
    const indirectPrimitivePatch setPatch
    (
        IndirectList<face>(mesh.faces(), set.sortedToc()),
        mesh.points()
    );
 
    const fileName outputDir
    (
        set.time().path()
      / (Pstream::parRun() ? ".." : "")
      / "postProcessing"
      / mesh.pointsInstance()
      / set.name()
    );
 
 
    if (Pstream::parRun())
    {
        // Use tolerance from sampling (since we're doing exactly the same
        // when parallel merging)
        const scalar tol = sampledSurfaces::mergeTol();
        // dimension as fraction of mesh bounding box
        scalar mergeDim = tol * mesh.bounds().mag();
 
        pointField mergedPoints;
        faceList mergedFaces;
        labelList pointMergeMap;
 
        PatchTools::gatherAndMerge
        (
            mergeDim,
            setPatch,
            mergedPoints,
            mergedFaces,
            pointMergeMap
        );
        if (Pstream::master())
        {
            writer.write
            (
                outputDir,
                set.name(),
                mergedPoints,
                mergedFaces
            );
        }
    }
    else
    {
        writer.write
        (
            outputDir,
            set.name(),
            setPatch.localPoints(),
            setPatch.localFaces()
        );
    }
}
 
 
void Foam::mergeAndWrite
(
    const surfaceWriter& writer,
    const cellSet& set
)
{
    const polyMesh& mesh = refCast<const polyMesh>(set.db());
    const polyBoundaryMesh& pbm = mesh.boundaryMesh();
 
 
    // Determine faces on outside of cellSet
    PackedBoolList isInSet(mesh.nCells());
    forAllConstIter(cellSet, set, iter)
    {
        isInSet[iter.key()] = true;
    }
 
 
    boolList bndInSet(mesh.nFaces()-mesh.nInternalFaces());
    forAll(pbm, patchI)
    {
        const polyPatch& pp = pbm[patchI];
        const labelList& fc = pp.faceCells();
        forAll(fc, i)
        {
            bndInSet[pp.start()+i-mesh.nInternalFaces()] = isInSet[fc[i]];
        }
    }
    syncTools::swapBoundaryFaceList(mesh, bndInSet);
 
 
    DynamicList<label> outsideFaces(3*set.size());
    for (label faceI = 0; faceI < mesh.nInternalFaces(); faceI++)
    {
        bool ownVal = isInSet[mesh.faceOwner()[faceI]];
        bool neiVal = isInSet[mesh.faceNeighbour()[faceI]];
 
        if (ownVal != neiVal)
        {
            outsideFaces.append(faceI);
        }
    }
 
 
    forAll(pbm, patchI)
    {
        const polyPatch& pp = pbm[patchI];
        const labelList& fc = pp.faceCells();
        if (pp.coupled())
        {
            forAll(fc, i)
            {
                label faceI = pp.start()+i;
 
                bool neiVal = bndInSet[faceI-mesh.nInternalFaces()];
                if (isInSet[fc[i]] && !neiVal)
                {
                    outsideFaces.append(faceI);
                }
            }
        }
        else
        {
            forAll(fc, i)
            {
                if (isInSet[fc[i]])
                {
                    outsideFaces.append(pp.start()+i);
                }
            }
        }
    }
 
 
    const indirectPrimitivePatch setPatch
    (
        IndirectList<face>(mesh.faces(), outsideFaces),
        mesh.points()
    );
 
    const fileName outputDir
    (
        set.time().path()
      / (Pstream::parRun() ? ".." : "")
      / "postProcessing"
      / mesh.pointsInstance()
      / set.name()
    );
 
 
    if (Pstream::parRun())
    {
        // Use tolerance from sampling (since we're doing exactly the same
        // when parallel merging)
        const scalar tol = sampledSurfaces::mergeTol();
        // dimension as fraction of mesh bounding box
        scalar mergeDim = tol * mesh.bounds().mag();
 
        pointField mergedPoints;
        faceList mergedFaces;
        labelList pointMergeMap;
 
        PatchTools::gatherAndMerge
        (
            mergeDim,
            setPatch,
            mergedPoints,
            mergedFaces,
            pointMergeMap
        );
        if (Pstream::master())
        {
            writer.write
            (
                outputDir,
                set.name(),
                mergedPoints,
                mergedFaces
            );
        }
    }
    else
    {
        writer.write
        (
            outputDir,
            set.name(),
            setPatch.localPoints(),
            setPatch.localFaces()
        );
    }
}